Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase family enzyme | SAMN06296052_109115 | Not Available | Negative | 2667998 - 2668906 | 33183.7 |
| peptidase family m48 | SAMN06296052_109116 | Not Available | Negative | 2668980 - 2669777 | 28837.2 |
| l,d-transpeptidase catalytic domain | SAMN06296052_109117 | Not Available | Negative | 2669943 - 2670749 | 29258.1 |
| hypothetical protein | SAMN06296052_109118 | Not Available | Positive | 2671011 - 2671412 | 15654.8 |
| hypothetical protein | SAMN06296052_109119 | Not Available | Negative | 2671443 - 2671841 | 14932.9 |
| hypothetical protein | SAMN06296052_109120 | Not Available | Positive | 2672147 - 2672380 | 8849.54 |
| protein of unknown function | SAMN06296052_109121 | Not Available | Negative | 2672469 - 2672918 | 16334.8 |
| protein of unknown function | SAMN06296052_109122 | Not Available | Negative | 2672976 - 2673446 | 17169.4 |
| atpase components of abc transporters with duplicated atpase domains | SAMN06296052_109123 | Not Available | Positive | 2673782 - 2675407 | 61069.4 |
| hypothetical protein | SAMN06296052_109124 | Not Available | Positive | 2675437 - 2676138 | 26288.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
