Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| broad specificity phosphatase phoe | SAMN06296052_10985 | Not Available | Positive | 2629851 - 2630696 | 31214.1 |
| dna recombination protein rmuc | SAMN06296052_10986 | Not Available | Positive | 2630949 - 2632274 | 50322.9 |
| peptidyl-dipeptidase a | SAMN06296052_10987 | Not Available | Positive | 2632458 - 2634287 | 69960.4 |
| alanine-synthesizing transaminase | SAMN06296052_10988 | Not Available | Negative | 2634393 - 2635661 | 46559.8 |
| predicted kinase | SAMN06296052_10989 | Not Available | Negative | 2635785 - 2636225 | 17117.7 |
| lsu ribosomal protein l20p | SAMN06296052_10990 | Not Available | Negative | 2636308 - 2636601 | 11122.8 |
| lsu ribosomal protein l35p | SAMN06296052_10991 | Not Available | Negative | 2636738 - 2636887 | 5522.93 |
| bacterial translation initiation factor 3 (bif-3) | SAMN06296052_10992 | Not Available | Negative | 2636956 - 2637375 | 15953.6 |
| threonyl-trna synthetase | SAMN06296052_10993 | Not Available | Negative | 2637598 - 2639535 | 74137.4 |
| tetratricopeptide repeat-containing protein | SAMN06296052_10994 | Not Available | Negative | 2639543 - 2640622 | 40017.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
