Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-lactate dehydrogenase complex protein lldgSAMN06296052_101175Not AvailableNegative168795 - 16944824522.4
membrane protease ftsh catalytic subunitSAMN06296052_101176Not AvailableNegative169461 - 17157277726.7
ribosome-associated proteinSAMN06296052_101177Not AvailableNegative171641 - 17201513840.3
bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligaseSAMN06296052_101178Not AvailablePositive172066 - 17281527860.4
hypothetical proteinSAMN06296052_101179Not AvailableNegative172750 - 1730019398.58
por secretion system c-terminal sorting domain-containing proteinSAMN06296052_101180Not AvailablePositive173097 - 17369321544.0
protein of unknown functionSAMN06296052_101181Not AvailablePositive173817 - 176765111667.0
gwxtd domain-containing proteinSAMN06296052_101182Not AvailablePositive176852 - 17808446641.0
23s rrna (guanosine2251-2'-o)-methyltransferaseSAMN06296052_101183Not AvailablePositive178057 - 17887229875.2
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive180046 - 18013118.01

Displaying genes 231 – 240 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.