Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase complex protein lldg | SAMN06296052_101175 | Not Available | Negative | 168795 - 169448 | 24522.4 |
| membrane protease ftsh catalytic subunit | SAMN06296052_101176 | Not Available | Negative | 169461 - 171572 | 77726.7 |
| ribosome-associated protein | SAMN06296052_101177 | Not Available | Negative | 171641 - 172015 | 13840.3 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN06296052_101178 | Not Available | Positive | 172066 - 172815 | 27860.4 |
| hypothetical protein | SAMN06296052_101179 | Not Available | Negative | 172750 - 173001 | 9398.58 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_101180 | Not Available | Positive | 173097 - 173693 | 21544.0 |
| protein of unknown function | SAMN06296052_101181 | Not Available | Positive | 173817 - 176765 | 111667.0 |
| gwxtd domain-containing protein | SAMN06296052_101182 | Not Available | Positive | 176852 - 178084 | 46641.0 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN06296052_101183 | Not Available | Positive | 178057 - 178872 | 29875.2 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 180046 - 180131 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
