Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN06296052_10975 | Not Available | Positive | 2614702 - 2617494 | 105102.0 |
| dioxygenase | SAMN06296052_10976 | Not Available | Negative | 2617703 - 2618086 | 14131.9 |
| polyisoprenoid-binding protein ycei | SAMN06296052_10977 | Not Available | Negative | 2618356 - 2619030 | 23795.5 |
| outer membrane receptor proteins, mostly fe transport | SAMN06296052_10978 | Not Available | Negative | 2619161 - 2622118 | 107104.0 |
| histidine kinase | SAMN06296052_10979 | Not Available | Positive | 2622356 - 2623423 | 40816.3 |
| two component transcriptional regulator, lyttr family | SAMN06296052_10980 | Not Available | Positive | 2623420 - 2624166 | 28035.0 |
| transcriptional regulator, arac family | SAMN06296052_10981 | Not Available | Positive | 2624287 - 2625426 | 43166.2 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN06296052_10982 | Not Available | Positive | 2625516 - 2626688 | 45853.3 |
| predicted purr-regulated permease perm | SAMN06296052_10983 | Not Available | Negative | 2626897 - 2628030 | 42643.6 |
| atp-independent rna helicase dbpa | SAMN06296052_10984 | Not Available | Positive | 2628219 - 2629646 | 52009.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
