Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallo-beta-lactamase family protein | SAMN06296052_10965 | Not Available | Positive | 2605513 - 2606898 | 51829.6 |
| hypothetical protein | SAMN06296052_10966 | Not Available | Positive | 2607227 - 2607841 | 21929.9 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN06296052_10967 | Not Available | Negative | 2607927 - 2609192 | 47797.8 |
| res domain-containing protein | SAMN06296052_10968 | Not Available | Negative | 2609364 - 2609828 | 17094.8 |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN06296052_10969 | Not Available | Negative | 2609825 - 2610253 | 16126.5 |
| hypothetical protein | SAMN06296052_10970 | Not Available | Positive | 2610334 - 2611152 | 31335.4 |
| dna-o6-methylguanine--protein-cysteine s-methyltransferase /transcriptional regulator ada | SAMN06296052_10971 | Not Available | Positive | 2611272 - 2612141 | 32377.8 |
| acetyltransferase (gnat) domain-containing protein | SAMN06296052_10972 | Not Available | Positive | 2612152 - 2612694 | 20356.4 |
| chemotaxis protein motb | SAMN06296052_10973 | Not Available | Positive | 2612833 - 2613696 | 32156.5 |
| uncharacterized conserved protein, duf2062 family | SAMN06296052_10974 | Not Available | Negative | 2613823 - 2614317 | 17809.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
