Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd-(d/e)xk nuclease superfamily protein | SAMN06296052_10955 | Not Available | Positive | 2596074 - 2598983 | 112720.0 |
| hypothetical protein | SAMN06296052_10956 | Not Available | Positive | 2599092 - 2599703 | 21796.8 |
| uncharacterized membrane protein ygae, upf0421/duf939 family | SAMN06296052_10957 | Not Available | Positive | 2599938 - 2601026 | 39502.2 |
| predicted oxidoreductase | SAMN06296052_10958 | Not Available | Negative | 2601247 - 2602233 | 36306.5 |
| hypothetical protein | SAMN06296052_10959 | Not Available | Negative | 2602327 - 2602431 | 3765.52 |
| hypothetical protein | SAMN06296052_10960 | Not Available | Negative | 2602453 - 2602554 | 3948.99 |
| hypothetical protein | SAMN06296052_10961 | Not Available | Negative | 2602574 - 2602969 | 15207.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN06296052_10962 | Not Available | Positive | 2603246 - 2604283 | 39404.5 |
| zinc transporter, zip family | SAMN06296052_10963 | Not Available | Negative | 2604315 - 2605145 | 29719.7 |
| hypothetical protein | SAMN06296052_10964 | Not Available | Negative | 2605338 - 2605481 | 4915.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
