Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06296052_10945 | Not Available | Negative | 2582958 - 2583842 | 31846.4 |
| nuclease a inhibitor-like protein | SAMN06296052_10946 | Not Available | Positive | 2583945 - 2584391 | 16583.8 |
| phytoene dehydrogenase-related protein | SAMN06296052_10947 | Not Available | Negative | 2584388 - 2585842 | 54193.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN06296052_10948 | Not Available | Positive | 2585845 - 2586762 | 33885.8 |
| hypothetical protein | SAMN06296052_10949 | Not Available | Positive | 2586864 - 2588102 | 45295.6 |
| conserved hypothetical protein | SAMN06296052_10950 | Not Available | Positive | 2588182 - 2588634 | 17329.4 |
| atp-dependent rna helicase dead | SAMN06296052_10951 | Not Available | Negative | 2589014 - 2590777 | 65549.7 |
| hypothetical protein | SAMN06296052_10952 | Not Available | Positive | 2591440 - 2591985 | 20171.5 |
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN06296052_10953 | Not Available | Positive | 2592149 - 2595550 | 131907.0 |
| hypothetical protein | SAMN06296052_10954 | Not Available | Positive | 2595605 - 2595982 | 13723.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
