Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ykva, duf1232 family | SAMN06296052_10935 | Not Available | Positive | 2569620 - 2570072 | 17237.2 |
| carboxypepd_reg-like domain-containing protein | SAMN06296052_10936 | Not Available | Positive | 2570497 - 2573139 | 100263.0 |
| hypothetical protein | SAMN06296052_10937 | Not Available | Negative | 2573323 - 2573718 | 15117.8 |
| hypothetical protein | SAMN06296052_10938 | Not Available | Positive | 2574121 - 2574735 | 23393.6 |
| predicted lipoprotein with conserved yx(fwy)xxd motif | SAMN06296052_10939 | Not Available | Negative | 2574810 - 2575373 | 20400.5 |
| transcriptional regulator, tetr family | SAMN06296052_10940 | Not Available | Positive | 2575623 - 2576192 | 21996.7 |
| outer membrane protein tolc | SAMN06296052_10941 | Not Available | Positive | 2576348 - 2577679 | 50658.5 |
| membrane fusion protein, multidrug efflux system | SAMN06296052_10942 | Not Available | Positive | 2577695 - 2578840 | 41407.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN06296052_10943 | Not Available | Positive | 2578877 - 2582077 | 115493.0 |
| hypothetical protein | SAMN06296052_10944 | Not Available | Positive | 2582240 - 2582872 | 22694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
