Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_10915 | Not Available | Negative | 2546486 - 2547202 | 25523.2 |
| nitrogen fixation protein fixh | SAMN06296052_10916 | Not Available | Negative | 2547204 - 2547671 | 17612.0 |
| cytochrome c oxidase accessory protein fixg | SAMN06296052_10917 | Not Available | Negative | 2547778 - 2549181 | 52986.1 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN06296052_10918 | Not Available | Negative | 2549452 - 2550660 | 44199.8 |
| hypothetical protein | SAMN06296052_10919 | Not Available | Negative | 2550657 - 2550851 | 7338.11 |
| cytochrome c oxidase cbb3-type subunit i/ii | SAMN06296052_10920 | Not Available | Negative | 2550955 - 2553144 | 82929.4 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN06296052_10921 | Not Available | Negative | 2553903 - 2554079 | 6436.74 |
| cu+-exporting atpase | SAMN06296052_10922 | Not Available | Negative | 2554218 - 2556623 | 88507.0 |
| copper binding protein, plastocyanin/azurin family | SAMN06296052_10923 | Not Available | Negative | 2557108 - 2557641 | 19113.8 |
| murein l,d-transpeptidase ycbb/ykud | SAMN06296052_10924 | Not Available | Negative | 2557679 - 2559433 | 68705.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
