Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa hydrolase | SAMN06296052_1095 | Not Available | Positive | 2531942 - 2533231 | 47030.5 |
| protein of unknown function | SAMN06296052_1096 | Not Available | Positive | 2533310 - 2534143 | 30015.8 |
| hypothetical protein | SAMN06296052_1097 | Not Available | Positive | 2534143 - 2534424 | 10206.0 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06296052_1098 | Not Available | Positive | 2534566 - 2535924 | 50733.0 |
| pas domain s-box-containing protein | SAMN06296052_1099 | Not Available | Positive | 2536092 - 2540414 | 164225.0 |
| amidohydrolase | SAMN06296052_10910 | Not Available | Positive | 2540668 - 2541825 | 42623.0 |
| alanine racemase | SAMN06296052_10911 | Not Available | Positive | 2541832 - 2542983 | 42828.8 |
| voltage-gated potassium channel | SAMN06296052_10912 | Not Available | Negative | 2543021 - 2543839 | 30333.9 |
| uncharacterized membrane protein | SAMN06296052_10913 | Not Available | Negative | 2543938 - 2545323 | 52653.8 |
| universal stress protein family protein | SAMN06296052_10914 | Not Available | Negative | 2545436 - 2546350 | 33881.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
