Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN06296052_108179 | Not Available | Negative | 2518214 - 2519464 | 47641.6 |
| response regulator receiver domain-containing protein | SAMN06296052_108180 | Not Available | Negative | 2519490 - 2519939 | 16977.5 |
| two-component system, luxr family, sensor kinase fixl | SAMN06296052_108181 | Not Available | Negative | 2519950 - 2521494 | 58318.9 |
| outer membrane receptor proteins, mostly fe transport | SAMN06296052_108182 | Not Available | Positive | 2521924 - 2524275 | 89154.3 |
| protein of unknown function | SAMN06296052_108183 | Not Available | Positive | 2524282 - 2525322 | 40377.6 |
| voltage gated chloride channel | SAMN06296052_108184 | Not Available | Negative | 2525364 - 2526060 | 25461.0 |
| hypothetical protein | SAMN06296052_1091 | Not Available | Positive | 2526561 - 2527034 | 17880.4 |
| uncharacterized protein | SAMN06296052_1092 | Not Available | Positive | 2528297 - 2528953 | 24756.2 |
| kef-type potassium/proton antiporter, cpa2 family | SAMN06296052_1093 | Not Available | Positive | 2529070 - 2531064 | 73502.5 |
| protein of unknown function | SAMN06296052_1094 | Not Available | Negative | 2531076 - 2531663 | 21789.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
