Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN06296052_101165Not AvailableNegative158259 - 16025967432.3
cold-shock dna-binding protein familySAMN06296052_101166Not AvailablePositive160671 - 1608627110.52
uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamilySAMN06296052_101167Not AvailableNegative160985 - 16207642030.1
gliding motility-associated lipoprotein gldhSAMN06296052_101168Not AvailableNegative162259 - 16274118273.9
cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development)SAMN06296052_101169Not AvailableNegative162734 - 16418854936.5
membrane protein involved in the export of o-antigen and teichoic acidSAMN06296052_101170Not AvailablePositive164413 - 16583153171.4
ribosomal protein s18 acetylase rimiSAMN06296052_101171Not AvailablePositive165920 - 16678932593.3
quaternary ammonium compound-resistance protein sugeSAMN06296052_101172Not AvailablePositive166885 - 16721411567.7
hypothetical proteinSAMN06296052_101173Not AvailableNegative167218 - 16802730850.1
udp-2,3-diacylglucosamine hydrolaseSAMN06296052_101174Not AvailableNegative168041 - 16881129428.2

Displaying genes 221 – 230 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.