Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_101165 | Not Available | Negative | 158259 - 160259 | 67432.3 |
| cold-shock dna-binding protein family | SAMN06296052_101166 | Not Available | Positive | 160671 - 160862 | 7110.52 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN06296052_101167 | Not Available | Negative | 160985 - 162076 | 42030.1 |
| gliding motility-associated lipoprotein gldh | SAMN06296052_101168 | Not Available | Negative | 162259 - 162741 | 18273.9 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN06296052_101169 | Not Available | Negative | 162734 - 164188 | 54936.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN06296052_101170 | Not Available | Positive | 164413 - 165831 | 53171.4 |
| ribosomal protein s18 acetylase rimi | SAMN06296052_101171 | Not Available | Positive | 165920 - 166789 | 32593.3 |
| quaternary ammonium compound-resistance protein suge | SAMN06296052_101172 | Not Available | Positive | 166885 - 167214 | 11567.7 |
| hypothetical protein | SAMN06296052_101173 | Not Available | Negative | 167218 - 168027 | 30850.1 |
| udp-2,3-diacylglucosamine hydrolase | SAMN06296052_101174 | Not Available | Negative | 168041 - 168811 | 29428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
