Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized iron-regulated membrane protein | SAMN06296052_108149 | Not Available | Negative | 2480298 - 2481497 | 44160.8 |
| iron complex outermembrane recepter protein | SAMN06296052_108150 | Not Available | Negative | 2481598 - 2484036 | 90662.4 |
| transcriptional regulator, arac family | SAMN06296052_108151 | Not Available | Positive | 2484146 - 2485150 | 38782.8 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN06296052_108152 | Not Available | Positive | 2485533 - 2487356 | 69759.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_108153 | Not Available | Negative | 2487458 - 2488537 | 40890.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_108154 | Not Available | Negative | 2488521 - 2490437 | 74121.9 |
| adp-heptose:lps heptosyltransferase | SAMN06296052_108155 | Not Available | Negative | 2490476 - 2491609 | 41890.1 |
| glycosyl transferase family 2 | SAMN06296052_108156 | Not Available | Negative | 2491650 - 2492453 | 30223.3 |
| lipopolysaccharide heptosyltransferase ii | SAMN06296052_108157 | Not Available | Negative | 2492450 - 2493595 | 42580.2 |
| d-beta-d-heptose 7-phosphate kinase / d-beta-d-heptose 1-phosphate adenosyltransferase | SAMN06296052_108158 | Not Available | Negative | 2493588 - 2495096 | 55637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
