Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_108139 | Not Available | Positive | 2471251 - 2471586 | 11963.7 |
| glycosyltransferase, gt2 family | SAMN06296052_108140 | Not Available | Positive | 2471690 - 2472598 | 34283.5 |
| phage shock protein c (pspc) family protein | SAMN06296052_108141 | Not Available | Negative | 2472593 - 2472811 | 8480.66 |
| tetratricopeptide repeat-containing protein | SAMN06296052_108142 | Not Available | Positive | 2472947 - 2474722 | 66929.5 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN06296052_108143 | Not Available | Positive | 2474807 - 2475790 | 36130.4 |
| membrane protein | SAMN06296052_108144 | Not Available | Negative | 2475880 - 2476788 | 33336.0 |
| nitroreductase | SAMN06296052_108145 | Not Available | Negative | 2476898 - 2477572 | 25595.5 |
| methyltransferase domain-containing protein | SAMN06296052_108146 | Not Available | Negative | 2477605 - 2478327 | 26958.3 |
| dinb superfamily protein | SAMN06296052_108147 | Not Available | Positive | 2478527 - 2479093 | 21844.8 |
| polysaccharide deacetylase | SAMN06296052_108148 | Not Available | Positive | 2479336 - 2480145 | 30298.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
