Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_108129 | Not Available | Positive | 2458036 - 2459223 | 45415.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_108130 | Not Available | Positive | 2459225 - 2460259 | 38673.8 |
| o-antigen ligase | SAMN06296052_108131 | Not Available | Positive | 2460471 - 2461574 | 41696.8 |
| glycosyltransferase, gt2 family | SAMN06296052_108132 | Not Available | Positive | 2461543 - 2462310 | 29908.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_108133 | Not Available | Positive | 2462351 - 2463445 | 41142.8 |
| o-antigen ligase | SAMN06296052_108134 | Not Available | Positive | 2463468 - 2464727 | 47538.2 |
| undecaprenyl-phosphate galactose phosphotransferase/putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN06296052_108135 | Not Available | Positive | 2464711 - 2466099 | 52917.3 |
| histidyl-trna synthetase | SAMN06296052_108136 | Not Available | Positive | 2466192 - 2467586 | 51807.4 |
| histidine ammonia-lyase | SAMN06296052_108137 | Not Available | Positive | 2467594 - 2469087 | 54915.6 |
| gliding motility-associated c-terminal domain-containing protein | SAMN06296052_108138 | Not Available | Positive | 2469217 - 2471121 | 69305.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
