Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s1p | SAMN06296052_108109 | Not Available | Negative | 2433868 - 2435760 | 69903.9 |
| 5-methylcytosine-specific restriction endonuclease mcra | SAMN06296052_108110 | Not Available | Negative | 2436226 - 2436729 | 19101.3 |
| nlpc/p60 family protein | SAMN06296052_108111 | Not Available | Negative | 2436811 - 2437587 | 29199.0 |
| ssra-binding protein | SAMN06296052_108112 | Not Available | Negative | 2437642 - 2438109 | 18222.1 |
| o-sialoglycoprotein endopeptidase | SAMN06296052_108113 | Not Available | Negative | 2438374 - 2439381 | 36296.8 |
| autotransporter translocation and assembly factor tamb | SAMN06296052_108114 | Not Available | Positive | 2439447 - 2443940 | 166698.0 |
| cell division transport system permease protein | SAMN06296052_108115 | Not Available | Positive | 2444042 - 2444938 | 33597.6 |
| protein of unknown function | SAMN06296052_108116 | Not Available | Positive | 2444943 - 2445161 | 7967.05 |
| undecaprenyl-diphosphatase | SAMN06296052_108117 | Not Available | Positive | 2445162 - 2445995 | 30379.3 |
| trna pseudouridine synthase b | SAMN06296052_108118 | Not Available | Positive | 2445998 - 2446696 | 25749.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
