Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein, parb family | SAMN06296052_10889 | Not Available | Positive | 2414123 - 2415037 | 34324.4 |
| hypothetical protein | SAMN06296052_10890 | Not Available | Positive | 2415044 - 2415694 | 24155.8 |
| dihydrodipicolinate reductase | SAMN06296052_10891 | Not Available | Positive | 2415691 - 2416407 | 26338.3 |
| signal peptidase i | SAMN06296052_10892 | Not Available | Positive | 2416423 - 2417529 | 42513.8 |
| hypothetical protein | SAMN06296052_10893 | Not Available | Positive | 2417685 - 2418149 | 17403.6 |
| arsenate reductase | SAMN06296052_10894 | Not Available | Negative | 2418217 - 2418561 | 13328.3 |
| hypothetical protein | SAMN06296052_10895 | Not Available | Positive | 2418696 - 2419469 | 29735.2 |
| 3-isopropylmalate dehydrogenase | SAMN06296052_10896 | Not Available | Negative | 2419590 - 2420708 | 40409.3 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN06296052_10897 | Not Available | Negative | 2420696 - 2421292 | 22401.4 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN06296052_10898 | Not Available | Negative | 2421292 - 2422686 | 49897.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
