Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-dependent transporter, snf family | SAMN06296052_101155 | Not Available | Positive | 146661 - 148313 | 60835.6 |
| hypothetical protein | SAMN06296052_101156 | Not Available | Positive | 148347 - 148484 | 5201.22 |
| competence protein comea helix-hairpin-helix repeat region | SAMN06296052_101157 | Not Available | Positive | 148493 - 149440 | 36034.5 |
| methyltransferase domain-containing protein | SAMN06296052_101158 | Not Available | Negative | 149450 - 150289 | 31994.3 |
| 3-hydroxyisobutyrate dehydrogenase/glyoxylate/succinic semialdehyde reductase | SAMN06296052_101159 | Not Available | Negative | 150314 - 151186 | 31098.9 |
| mutator mutt protein | SAMN06296052_101160 | Not Available | Negative | 151365 - 151853 | 18225.7 |
| hypothetical protein | SAMN06296052_101161 | Not Available | Negative | 151906 - 152052 | 4902.99 |
| protein of unknown function | SAMN06296052_101162 | Not Available | Positive | 152305 - 156285 | 152942.0 |
| hypothetical protein | SAMN06296052_101163 | Not Available | Positive | 156330 - 157172 | 31919.7 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN06296052_101164 | Not Available | Positive | 157264 - 158139 | 32080.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
