Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase domain-containing protein 2 | SAMN06296052_10859 | Not Available | Negative | 2379422 - 2380978 | 57495.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN06296052_10860 | Not Available | Positive | 2381959 - 2382558 | 21420.5 |
| hypothetical protein | SAMN06296052_10861 | Not Available | Negative | 2382631 - 2383107 | 18326.1 |
| glutamate dehydrogenase (nad(p)+) | SAMN06296052_10862 | Not Available | Positive | 2383417 - 2384841 | 51645.9 |
| hypothetical protein | SAMN06296052_10863 | Not Available | Negative | 2384875 - 2385384 | 19648.6 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN06296052_10864 | Not Available | Negative | 2385564 - 2387372 | 68082.0 |
| hypothetical protein | SAMN06296052_10865 | Not Available | Negative | 2387467 - 2387889 | 15920.0 |
| nlpc/p60 family protein | SAMN06296052_10866 | Not Available | Positive | 2388160 - 2388720 | 20241.8 |
| hypothetical protein | SAMN06296052_10867 | Not Available | Positive | 2388810 - 2389184 | 13771.2 |
| uncharacterized conserved protein, duf2147 family | SAMN06296052_10868 | Not Available | Positive | 2389812 - 2390243 | 16243.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
