Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06296052_10819 | Not Available | Negative | 2328886 - 2329428 | 20666.6 |
| hypothetical protein | SAMN06296052_10820 | Not Available | Negative | 2329504 - 2330355 | 32516.5 |
| dna polymerase-3 subunit epsilon | SAMN06296052_10821 | Not Available | Positive | 2330388 - 2330945 | 20936.2 |
| cyanophycin synthetase | SAMN06296052_10822 | Not Available | Positive | 2331308 - 2333911 | 94749.1 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN06296052_10823 | Not Available | Negative | 2334426 - 2335307 | 30869.3 |
| hnh endonuclease | SAMN06296052_10824 | Not Available | Positive | 2335792 - 2336913 | 43354.1 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN06296052_10825 | Not Available | Positive | 2336888 - 2337766 | 33663.2 |
| predicted oxidoreductase | SAMN06296052_10826 | Not Available | Positive | 2337989 - 2338975 | 36817.7 |
| cysteine desulfurase family protein, vc1184 subfamily | SAMN06296052_10827 | Not Available | Positive | 2339037 - 2340278 | 45235.0 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN06296052_10828 | Not Available | Negative | 2340336 - 2342471 | 79827.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
