Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate permease | SAMN06296052_1089 | Not Available | Negative | 2317877 - 2319325 | 51871.9 |
| hemoglobin | SAMN06296052_10810 | Not Available | Positive | 2319723 - 2320118 | 14747.7 |
| fad/fmn-containing dehydrogenase | SAMN06296052_10811 | Not Available | Negative | 2320649 - 2322079 | 52761.4 |
| d-lactate dehydrogenase | SAMN06296052_10812 | Not Available | Negative | 2322264 - 2323256 | 36627.2 |
| hsp20 family protein | SAMN06296052_10813 | Not Available | Negative | 2323823 - 2324290 | 18142.3 |
| beta-lactamase superfamily domain-containing protein | SAMN06296052_10814 | Not Available | Positive | 2324555 - 2325160 | 22525.4 |
| beta-lactamase superfamily domain-containing protein | SAMN06296052_10815 | Not Available | Positive | 2325163 - 2325696 | 20504.6 |
| dna polymerase-3 subunit epsilon | SAMN06296052_10816 | Not Available | Positive | 2325742 - 2326287 | 20538.7 |
| hypothetical protein | SAMN06296052_10817 | Not Available | Negative | 2326386 - 2327237 | 31978.7 |
| hypothetical protein | SAMN06296052_10818 | Not Available | Negative | 2327396 - 2328892 | 55877.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
