Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | SAMN06296052_107185 | Not Available | Negative | 2306272 - 2307528 | 45448.4 |
| n-terminal double-transmembrane domain-containing protein | SAMN06296052_107186 | Not Available | Negative | 2307530 - 2309524 | 73247.1 |
| pas domain s-box-containing protein | SAMN06296052_1081 | Not Available | Negative | 2310010 - 2310181 | 6531.84 |
| protein of unknown function | SAMN06296052_1082 | Not Available | Negative | 2310642 - 2311511 | 31404.6 |
| hypothetical protein | SAMN06296052_1083 | Not Available | Negative | 2311607 - 2312137 | 19865.4 |
| mannose or cellobiose epimerase, n-acyl-d-glucosamine 2-epimerase family | SAMN06296052_1084 | Not Available | Negative | 2312752 - 2314239 | 57563.6 |
| hypothetical protein | SAMN06296052_1085 | Not Available | Positive | 2314639 - 2315283 | 23837.9 |
| prc-barrel domain-containing protein | SAMN06296052_1086 | Not Available | Positive | 2315496 - 2315990 | 18870.0 |
| hypothetical protein | SAMN06296052_1087 | Not Available | Positive | 2316382 - 2316747 | 14188.5 |
| membrane protein | SAMN06296052_1088 | Not Available | Positive | 2316945 - 2317856 | 33644.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
