Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN06296052_107175 | Not Available | Negative | 2294108 - 2294890 | 28861.4 |
| acetyltransferase (gnat) domain-containing protein | SAMN06296052_107176 | Not Available | Negative | 2294994 - 2295512 | 19652.5 |
| hypothetical protein | SAMN06296052_107177 | Not Available | Negative | 2295670 - 2298063 | 89781.7 |
| protein of unknown function | SAMN06296052_107178 | Not Available | Negative | 2298134 - 2299279 | 43469.3 |
| tonb-dependent receptor plug domain | SAMN06296052_107179 | Not Available | Negative | 2299285 - 2302053 | 103139.0 |
| hypothetical protein | SAMN06296052_107180 | Not Available | Negative | 2302117 - 2302875 | 28764.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_107181 | Not Available | Negative | 2303024 - 2304166 | 43116.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_107182 | Not Available | Negative | 2304166 - 2305140 | 37312.7 |
| protein of unknown function | SAMN06296052_107183 | Not Available | Negative | 2305144 - 2305662 | 19075.6 |
| protein of unknown function | SAMN06296052_107184 | Not Available | Negative | 2305691 - 2306200 | 18844.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
