Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit j | SAMN06296052_107135 | Not Available | Negative | 2249644 - 2250156 | 18387.4 |
| hypothetical protein | SAMN06296052_107136 | Not Available | Negative | 2250161 - 2250580 | 15633.2 |
| nadh-quinone oxidoreductase subunit i | SAMN06296052_107137 | Not Available | Negative | 2250772 - 2251380 | 22697.1 |
| nadh dehydrogenase subunit h | SAMN06296052_107138 | Not Available | Negative | 2251469 - 2252572 | 40334.7 |
| glutathionylspermidine synthase | SAMN06296052_107139 | Not Available | Negative | 2252793 - 2253977 | 44345.5 |
| hypothetical protein | SAMN06296052_107140 | Not Available | Negative | 2253999 - 2254547 | 19902.3 |
| glutamate racemase | SAMN06296052_107141 | Not Available | Negative | 2254636 - 2255481 | 31401.9 |
| rdd family protein | SAMN06296052_107142 | Not Available | Positive | 2255775 - 2256275 | 18754.1 |
| spw repeat-containing protein | SAMN06296052_107143 | Not Available | Positive | 2256376 - 2256765 | 14564.2 |
| atp-binding cassette, subfamily f, uup | SAMN06296052_107144 | Not Available | Positive | 2256858 - 2258738 | 71431.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
