Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase | SAMN06296052_107125 | Not Available | Negative | 2238194 - 2238766 | 21535.9 |
| methylmalonyl-coa epimerase | SAMN06296052_107126 | Not Available | Negative | 2238858 - 2239259 | 14769.7 |
| cysteine desulfurase iscs | SAMN06296052_107127 | Not Available | Positive | 2239375 - 2240589 | 44235.2 |
| nitrogen fixation protein nifu | SAMN06296052_107128 | Not Available | Positive | 2240639 - 2241052 | 14679.5 |
| iron-sulfur cluster assembly protein | SAMN06296052_107129 | Not Available | Positive | 2241163 - 2241489 | 11820.9 |
| amidophosphoribosyltransferase | SAMN06296052_107130 | Not Available | Negative | 2241723 - 2243618 | 72189.6 |
| nadh dehydrogenase subunit n | SAMN06296052_107131 | Not Available | Negative | 2243632 - 2245137 | 54802.8 |
| nadh dehydrogenase subunit m | SAMN06296052_107132 | Not Available | Negative | 2245138 - 2246880 | 63633.2 |
| nadh-quinone oxidoreductase subunit l | SAMN06296052_107133 | Not Available | Negative | 2247011 - 2249197 | 80027.0 |
| nadh dehydrogenase subunit k | SAMN06296052_107134 | Not Available | Negative | 2249327 - 2249641 | 11327.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
