Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing system permease protein | SAMN06296052_107115 | Not Available | Negative | 2222018 - 2223226 | 45037.4 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN06296052_107116 | Not Available | Positive | 2223260 - 2224519 | 46216.8 |
| methionyl-trna formyltransferase | SAMN06296052_107117 | Not Available | Positive | 2224523 - 2225452 | 34749.9 |
| dihydrofolate reductase | SAMN06296052_107118 | Not Available | Positive | 2225457 - 2225942 | 18229.9 |
| interleukin-like emt inducer | SAMN06296052_107119 | Not Available | Negative | 2226004 - 2231082 | 187694.0 |
| hypothetical protein | SAMN06296052_107120 | Not Available | Negative | 2231090 - 2232187 | 39763.1 |
| transcriptional regulator, padr family | SAMN06296052_107121 | Not Available | Positive | 2232472 - 2232810 | 13051.8 |
| phage shock protein c (pspc) family protein | SAMN06296052_107122 | Not Available | Positive | 2232813 - 2235344 | 92790.5 |
| hypothetical protein | SAMN06296052_107123 | Not Available | Positive | 2235654 - 2236535 | 32891.0 |
| hdig domain-containing protein | SAMN06296052_107124 | Not Available | Negative | 2236568 - 2238010 | 54658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
