Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| b12 binding domain-containing protein | SAMN06296052_107105 | Not Available | Negative | 2212340 - 2213215 | 33899.4 |
| beta-carotene 3-hydroxylase | SAMN06296052_107106 | Not Available | Negative | 2213196 - 2213687 | 19140.6 |
| methylglutaconyl-coa hydratase | SAMN06296052_107107 | Not Available | Negative | 2213736 - 2214545 | 30142.7 |
| transcriptional regulator, tetr family | SAMN06296052_107108 | Not Available | Positive | 2214783 - 2215358 | 21555.9 |
| nlpe n-terminal domain-containing protein | SAMN06296052_107109 | Not Available | Negative | 2215443 - 2216435 | 36397.1 |
| oligoendopeptidase f | SAMN06296052_107110 | Not Available | Negative | 2216407 - 2218137 | 67831.2 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN06296052_107111 | Not Available | Negative | 2218253 - 2219383 | 41629.1 |
| hnh endonuclease | SAMN06296052_107112 | Not Available | Positive | 2219641 - 2220204 | 22065.6 |
| peptidase family m23 | SAMN06296052_107113 | Not Available | Positive | 2220253 - 2220951 | 25928.6 |
| small conductance mechanosensitive channel | SAMN06296052_107114 | Not Available | Positive | 2221048 - 2221884 | 30763.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
