Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_10795 | Not Available | Negative | 2204047 - 2204475 | 15947.2 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN06296052_10796 | Not Available | Negative | 2204507 - 2205427 | 34831.6 |
| mraz protein | SAMN06296052_10797 | Not Available | Negative | 2205427 - 2205894 | 17787.4 |
| beta-carotene ketolase (crtw type) | SAMN06296052_10798 | Not Available | Negative | 2206352 - 2207065 | 28088.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN06296052_10799 | Not Available | Negative | 2207113 - 2207964 | 31990.1 |
| lycopene cyclase domain-containing protein | SAMN06296052_107100 | Not Available | Negative | 2207972 - 2208670 | 27089.0 |
| hypothetical protein | SAMN06296052_107101 | Not Available | Negative | 2208689 - 2209225 | 20691.3 |
| phytoene/squalene synthetase | SAMN06296052_107102 | Not Available | Negative | 2209226 - 2210059 | 32282.2 |
| phytoene desaturase | SAMN06296052_107103 | Not Available | Negative | 2210079 - 2211572 | 56379.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06296052_107104 | Not Available | Negative | 2211597 - 2212112 | 19882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
