Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN06296052_10765 | Not Available | Positive | 2165826 - 2166851 | 36918.1 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN06296052_10766 | Not Available | Positive | 2166857 - 2168209 | 51112.0 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN06296052_10767 | Not Available | Negative | 2168244 - 2168699 | 17775.4 |
| hypothetical protein | SAMN06296052_10768 | Not Available | Positive | 2169076 - 2169342 | 10120.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_10769 | Not Available | Positive | 2169680 - 2173051 | 121910.0 |
| aconitase | SAMN06296052_10770 | Not Available | Negative | 2173151 - 2175430 | 82083.9 |
| peroxiredoxin | SAMN06296052_10771 | Not Available | Positive | 2175625 - 2176887 | 46763.1 |
| phosphatidylethanolamine n-methyltransferase /phosphatidyl-n-methylethanolamine n-methyltransferase | SAMN06296052_10772 | Not Available | Negative | 2177127 - 2177747 | 22837.1 |
| hypothetical protein | SAMN06296052_10773 | Not Available | Negative | 2177779 - 2177904 | 4613.54 |
| octaprenyl-diphosphate synthase | SAMN06296052_10774 | Not Available | Negative | 2178117 - 2179094 | 36940.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
