Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN06296052_10755 | Not Available | Negative | 2155851 - 2157215 | 48688.4 |
| alginate export | SAMN06296052_10756 | Not Available | Negative | 2157275 - 2158564 | 48268.9 |
| assimilatory nitrite reductase (nad(p)h) small subunit | SAMN06296052_10757 | Not Available | Negative | 2158771 - 2159130 | 13135.8 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN06296052_10758 | Not Available | Negative | 2159183 - 2161696 | 91483.5 |
| hypothetical protein | SAMN06296052_10759 | Not Available | Positive | 2161852 - 2161977 | 4914.92 |
| uroporphyrinogen-iii c-methyltransferase | SAMN06296052_10760 | Not Available | Positive | 2162500 - 2163219 | 26320.1 |
| protein of unknown function | SAMN06296052_10761 | Not Available | Negative | 2163251 - 2163799 | 20461.2 |
| rsbt co-antagonist protein rsbr | SAMN06296052_10762 | Not Available | Positive | 2164147 - 2165019 | 32215.0 |
| rsbt antagonist protein rsbs | SAMN06296052_10763 | Not Available | Positive | 2165029 - 2165439 | 14808.2 |
| serine/threonine-protein kinase rsbt | SAMN06296052_10764 | Not Available | Positive | 2165426 - 2165836 | 14882.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
