Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxygen toleranceSAMN06296052_101135Not AvailablePositive125452 - 12689154208.9
chorismate synthaseSAMN06296052_101136Not AvailablePositive126895 - 12797438684.2
abc-type lipopolysaccharide export system, atpase componentSAMN06296052_101137Not AvailableNegative128344 - 12901825798.2
hypothetical proteinSAMN06296052_101138Not AvailableNegative129011 - 12933412397.6
transporter, uit6 familySAMN06296052_101139Not AvailableNegative129443 - 13082851082.3
fe-s cluster biogenesis protein nfua, 4fe-4s-binding domainSAMN06296052_101140Not AvailablePositive131044 - 13165522035.2
secd/secf fusion proteinSAMN06296052_101141Not AvailableNegative132325 - 135294107925.0
hypothetical proteinSAMN06296052_101142Not AvailableNegative135502 - 13582511294.5
trk system potassium uptake protein trkaSAMN06296052_101143Not AvailableNegative135923 - 13661525726.2
uridine kinaseSAMN06296052_101144Not AvailableNegative136612 - 13723223869.6

Displaying genes 191 – 200 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.