Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, gt2 family | SAMN06296052_106240 | Not Available | Positive | 2086344 - 2087207 | 33222.7 |
| hypothetical protein | SAMN06296052_106241 | Not Available | Positive | 2087241 - 2088149 | 35019.7 |
| transferase hexapeptide (six repeat-containing protein) | SAMN06296052_106242 | Not Available | Positive | 2088156 - 2088737 | 22320.0 |
| n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-mannosaminyltransferase | SAMN06296052_106243 | Not Available | Positive | 2089125 - 2089880 | 28267.3 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN06296052_106244 | Not Available | Positive | 2090136 - 2091530 | 53807.4 |
| udp-glucose/gdp-mannose dehydrogenase family, nad binding domain | SAMN06296052_106245 | Not Available | Positive | 2091602 - 2091694 | 3173.95 |
| hypothetical protein | SAMN06296052_1071 | Not Available | Negative | 2091695 - 2091779 | 3211.14 |
| malate dehydrogenase (quinone) | SAMN06296052_1072 | Not Available | Positive | 2092087 - 2093598 | 55806.3 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN06296052_1073 | Not Available | Negative | 2093719 - 2094111 | 15105.9 |
| pas domain s-box-containing protein | SAMN06296052_1074 | Not Available | Negative | 2094129 - 2096672 | 96113.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
