Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_106230 | Not Available | Positive | 2069587 - 2070525 | 35508.8 |
| hypothetical protein | SAMN06296052_106231 | Not Available | Positive | 2070525 - 2071439 | 33944.5 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN06296052_106232 | Not Available | Positive | 2072120 - 2074072 | 73503.4 |
| polysaccharide export outer membrane protein | SAMN06296052_106233 | Not Available | Positive | 2076061 - 2076846 | 29026.1 |
| capsular exopolysaccharide family | SAMN06296052_106234 | Not Available | Positive | 2076859 - 2079228 | 88717.0 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN06296052_106235 | Not Available | Positive | 2079590 - 2080870 | 48339.9 |
| hypothetical protein | SAMN06296052_106236 | Not Available | Positive | 2081003 - 2081953 | 37687.8 |
| o-antigen ligase | SAMN06296052_106237 | Not Available | Positive | 2082197 - 2083669 | 55776.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_106238 | Not Available | Positive | 2083742 - 2084899 | 43417.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_106239 | Not Available | Positive | 2084901 - 2085989 | 41216.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
