Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN06296052_106210 | Not Available | Positive | 2046237 - 2047211 | 36653.8 |
| predicted dehydrogenase | SAMN06296052_106211 | Not Available | Positive | 2047218 - 2048168 | 35659.7 |
| hypothetical protein | SAMN06296052_106212 | Not Available | Positive | 2048174 - 2048917 | 28350.3 |
| n-acylneuraminate cytidylyltransferase | SAMN06296052_106213 | Not Available | Positive | 2048917 - 2049603 | 25500.8 |
| atp-binding cassette, subfamily b, msba | SAMN06296052_106214 | Not Available | Positive | 2049596 - 2051395 | 68289.3 |
| methyltransferase domain-containing protein | SAMN06296052_106215 | Not Available | Positive | 2051585 - 2052268 | 26244.6 |
| cmp-n-acetylneuraminate monooxygenase | SAMN06296052_106216 | Not Available | Positive | 2052282 - 2053979 | 65006.4 |
| hypothetical protein | SAMN06296052_106217 | Not Available | Positive | 2054539 - 2055690 | 44390.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_106218 | Not Available | Positive | 2055985 - 2057082 | 40490.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_106219 | Not Available | Positive | 2057244 - 2058401 | 42928.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
