Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:h+ antiporter | SAMN06296052_106180 | Not Available | Negative | 2011777 - 2012739 | 34510.4 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN06296052_106181 | Not Available | Negative | 2012859 - 2013566 | 26663.6 |
| abc transporter | SAMN06296052_106182 | Not Available | Negative | 2013780 - 2014412 | 24019.8 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN06296052_106183 | Not Available | Negative | 2014402 - 2015193 | 28524.6 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase /udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN06296052_106184 | Not Available | Negative | 2015190 - 2016584 | 51094.1 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN06296052_106185 | Not Available | Negative | 2016732 - 2017784 | 37011.0 |
| hypothetical protein | SAMN06296052_106186 | Not Available | Negative | 2017977 - 2019209 | 47049.8 |
| response regulator receiver domain-containing protein | SAMN06296052_106187 | Not Available | Positive | 2019362 - 2020924 | 60707.3 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN06296052_106188 | Not Available | Positive | 2020953 - 2021363 | 15088.0 |
| alanine dehydrogenase | SAMN06296052_106189 | Not Available | Positive | 2021365 - 2022591 | 44908.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
