Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | SAMN06296052_106160 | Not Available | Positive | 1990585 - 1991406 | 30455.3 |
| uncharacterized conserved protein yehs, duf1456 family | SAMN06296052_106161 | Not Available | Positive | 1991454 - 1991921 | 18225.8 |
| protein of unknown function | SAMN06296052_106162 | Not Available | Positive | 1992023 - 1993312 | 49878.8 |
| hypothetical protein | SAMN06296052_106163 | Not Available | Positive | 1993309 - 1994595 | 48213.5 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | SAMN06296052_106164 | Not Available | Positive | 1994653 - 1995288 | 22044.6 |
| upf0176 protein | SAMN06296052_106165 | Not Available | Positive | 1995460 - 1996428 | 36977.0 |
| d-alanine transaminase/branched-chain amino acid aminotransferase | SAMN06296052_106166 | Not Available | Negative | 1996483 - 1997337 | 31771.5 |
| l-aminopeptidase dmpa. serine peptidase. merops family s58 | SAMN06296052_106167 | Not Available | Negative | 1997321 - 1998457 | 40068.2 |
| uridine phosphorylase | SAMN06296052_106168 | Not Available | Positive | 1998715 - 1999569 | 31657.1 |
| hypothetical protein | SAMN06296052_106169 | Not Available | Negative | 1999671 - 1999970 | 11332.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
