Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | SAMN06296052_106140 | Not Available | Negative | 1971095 - 1971577 | 17925.4 |
| saccharopine dehydrogenase, nadp-dependent | SAMN06296052_106141 | Not Available | Positive | 1971704 - 1973053 | 50391.7 |
| trna1val (adenine37-n6)-methyltransferase | SAMN06296052_106142 | Not Available | Negative | 1973071 - 1973787 | 26937.1 |
| rnase hi | SAMN06296052_106143 | Not Available | Negative | 1973941 - 1974405 | 17122.5 |
| multiple antibiotic resistance protein | SAMN06296052_106144 | Not Available | Negative | 1974484 - 1975044 | 20270.9 |
| phosphoserine aminotransferase apoenzyme | SAMN06296052_106145 | Not Available | Negative | 1975167 - 1976228 | 40666.6 |
| 3-dehydroquinate dehydratase | SAMN06296052_106146 | Not Available | Negative | 1976319 - 1976768 | 16737.0 |
| integrase/recombinase xerd | SAMN06296052_106147 | Not Available | Positive | 1976954 - 1977853 | 34191.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN06296052_106148 | Not Available | Positive | 1978561 - 1979112 | 21099.2 |
| predicted dehydrogenase | SAMN06296052_106149 | Not Available | Negative | 1979350 - 1980468 | 41065.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
