Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_106110 | Not Available | Positive | 1943639 - 1943755 | 4474.61 |
| ribose-phosphate pyrophosphokinase | SAMN06296052_106111 | Not Available | Negative | 1943752 - 1944681 | 33559.6 |
| Trna-gln | Not Available | Not Available | Positive | 1944850 - 1944922 | Not Available |
| hypothetical protein | SAMN06296052_106113 | Not Available | Positive | 1945730 - 1945951 | 8507.19 |
| atp synthase f1 subcomplex beta subunit | SAMN06296052_106114 | Not Available | Positive | 1946264 - 1947775 | 54377.1 |
| atp synthase f1 subcomplex epsilon subunit | SAMN06296052_106115 | Not Available | Positive | 1947860 - 1948105 | 8716.43 |
| 2,4-dienoyl-coa reductase | SAMN06296052_106116 | Not Available | Negative | 1948197 - 1949309 | 40548.9 |
| cystathionine gamma-synthase | SAMN06296052_106117 | Not Available | Positive | 1949475 - 1950602 | 41818.4 |
| pyridoxal phosphate-dependent aminotransferase epsn | SAMN06296052_106118 | Not Available | Negative | 1950629 - 1951762 | 41799.2 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN06296052_106119 | Not Available | Positive | 1952077 - 1952889 | 29636.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
