Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | SAMN06296052_106100 | Not Available | Negative | 1932163 - 1933968 | 67432.1 |
| peptide-methionine (r)-s-oxide reductase | SAMN06296052_106101 | Not Available | Positive | 1934227 - 1934778 | 20397.8 |
| protein of unknown function | SAMN06296052_106102 | Not Available | Positive | 1934847 - 1935662 | 31335.4 |
| hypothetical protein | SAMN06296052_106103 | Not Available | Positive | 1935743 - 1936009 | 10204.0 |
| hypothetical protein | SAMN06296052_106104 | Not Available | Negative | 1936093 - 1936317 | 8502.77 |
| methionyl-trna synthetase | SAMN06296052_106105 | Not Available | Positive | 1936548 - 1938587 | 76438.2 |
| tolb amino-terminal domain-containing protein | SAMN06296052_106106 | Not Available | Positive | 1938789 - 1940783 | 74828.6 |
| predicted arabinose efflux permease, mfs family | SAMN06296052_106107 | Not Available | Negative | 1940833 - 1942110 | 46196.6 |
| peptidyl-trna hydrolase | SAMN06296052_106108 | Not Available | Negative | 1942246 - 1942881 | 23440.4 |
| lsu ribosomal protein l25p | SAMN06296052_106109 | Not Available | Negative | 1943047 - 1943634 | 21542.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
