Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN06296052_10670 | Not Available | Negative | 1896549 - 1897007 | 16778.9 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN06296052_10671 | Not Available | Positive | 1897154 - 1897789 | 22798.9 |
| ribosome biogenesis gtpase | SAMN06296052_10672 | Not Available | Negative | 1897875 - 1898798 | 34569.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN06296052_10673 | Not Available | Negative | 1898795 - 1900126 | 50306.1 |
| n-dimethylarginine dimethylaminohydrolase | SAMN06296052_10674 | Not Available | Positive | 1900255 - 1901130 | 32897.4 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN06296052_10675 | Not Available | Negative | 1901190 - 1901828 | 23659.8 |
| fur family transcriptional regulator, peroxide stress response regulator | SAMN06296052_10676 | Not Available | Negative | 1901855 - 1902319 | 18002.4 |
| hypothetical protein | SAMN06296052_10677 | Not Available | Negative | 1902626 - 1902865 | 9052.4 |
| aspartate kinase | SAMN06296052_10678 | Not Available | Negative | 1902990 - 1904246 | 47970.4 |
| d-fructose 1,6-bisphosphatase | SAMN06296052_10679 | Not Available | Positive | 1904336 - 1905358 | 37510.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
