Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_10650 | Not Available | Negative | 1875739 - 1876644 | 33047.2 |
| d-tyrosyl-trna(tyr) deacylase | SAMN06296052_10651 | Not Available | Negative | 1876739 - 1877191 | 16191.8 |
| hypothetical protein | SAMN06296052_10652 | Not Available | Negative | 1877325 - 1877963 | 23491.9 |
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN06296052_10653 | Not Available | Positive | 1878103 - 1879005 | 33851.4 |
| nucleotide-binding universal stress protein, uspa family | SAMN06296052_10654 | Not Available | Negative | 1879002 - 1879898 | 33476.1 |
| hypothetical protein | SAMN06296052_10655 | Not Available | Positive | 1880061 - 1882781 | 102637.0 |
| magnesium transporter | SAMN06296052_10656 | Not Available | Negative | 1882797 - 1883927 | 44377.1 |
| uncharacterized protein, yigz family | SAMN06296052_10657 | Not Available | Negative | 1884067 - 1884672 | 22783.9 |
| hypothetical protein | SAMN06296052_10658 | Not Available | Negative | 1884676 - 1885584 | 33048.6 |
| wxcm-like, c-terminal | SAMN06296052_10659 | Not Available | Positive | 1885698 - 1886135 | 16255.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
