Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_10640 | Not Available | Positive | 1860532 - 1863693 | 113290.0 |
| susd family protein | SAMN06296052_10641 | Not Available | Positive | 1863712 - 1865181 | 53440.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_10642 | Not Available | Positive | 1865590 - 1868904 | 119732.0 |
| starch-binding associating with outer membrane | SAMN06296052_10643 | Not Available | Positive | 1868923 - 1870413 | 53805.5 |
| rnase hii | SAMN06296052_10644 | Not Available | Positive | 1870634 - 1871236 | 22189.6 |
| response regulator receiver domain-containing protein | SAMN06296052_10645 | Not Available | Negative | 1871255 - 1871689 | 16410.9 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN06296052_10646 | Not Available | Negative | 1871726 - 1873213 | 56171.9 |
| aminomethyltransferase | SAMN06296052_10647 | Not Available | Positive | 1873434 - 1874522 | 39848.6 |
| 2-phosphosulfolactate phosphatase | SAMN06296052_10648 | Not Available | Positive | 1874611 - 1875336 | 26274.4 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN06296052_10649 | Not Available | Negative | 1875397 - 1875723 | 12329.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
