Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose/gdp-mannose dehydrogenase family, nad binding domain | SAMN06296052_105250 | Not Available | Positive | 1817213 - 1817305 | 3173.95 |
| hypothetical protein | SAMN06296052_1061 | Not Available | Positive | 1817306 - 1817407 | 4000.67 |
| transcriptional regulator, deor family | SAMN06296052_1062 | Not Available | Negative | 1817508 - 1818251 | 27149.3 |
| beta-lactamase enzyme family protein | SAMN06296052_1063 | Not Available | Positive | 1818409 - 1819752 | 52379.0 |
| carboxypeptidase ss1. metallo peptidase. merops family m20d | SAMN06296052_1064 | Not Available | Positive | 1820057 - 1821394 | 47603.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_1065 | Not Available | Negative | 1821446 - 1822846 | 52208.1 |
| 5'-nucleotidase, c-terminal domain | SAMN06296052_1066 | Not Available | Positive | 1823031 - 1823786 | 27574.4 |
| 5'-nucleotidase | SAMN06296052_1067 | Not Available | Positive | 1823796 - 1824728 | 34931.9 |
| chromosomal replication initiator protein dnaa | SAMN06296052_1068 | Not Available | Positive | 1824836 - 1826260 | 54100.7 |
| hypothetical protein | SAMN06296052_1069 | Not Available | Negative | 1826348 - 1826857 | 19162.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
