Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN06296052_101104 | Not Available | Positive | 91740 - 92720 | 35397.2 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN06296052_101105 | Not Available | Negative | 92809 - 93519 | 27027.7 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN06296052_101106 | Not Available | Negative | 93715 - 94755 | 39518.1 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN06296052_101107 | Not Available | Negative | 94774 - 95463 | 26055.1 |
| protein of unknown function | SAMN06296052_101108 | Not Available | Negative | 95679 - 96488 | 31289.8 |
| recombination protein reca | SAMN06296052_101109 | Not Available | Negative | 96667 - 97713 | 37405.3 |
| hypothetical protein | SAMN06296052_101110 | Not Available | Positive | 97874 - 99025 | 44355.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN06296052_101111 | Not Available | Negative | 99067 - 99699 | 24407.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06296052_101112 | Not Available | Positive | 99878 - 100750 | 30728.5 |
| hypothetical protein | SAMN06296052_101113 | Not Available | Negative | 100846 - 101274 | 16503.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
