Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 1801511 - 1801584 | Not Available |
| carboxypeptidase regulatory-like domain-containing protein | SAMN06296052_105241 | Not Available | Negative | 1801702 - 1804977 | 120213.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN06296052_105242 | Not Available | Positive | 1805970 - 1808540 | 94183.9 |
| hypothetical protein | SAMN06296052_105243 | Not Available | Positive | 1808563 - 1809729 | 43800.8 |
| tonb-dependent receptor plug domain | SAMN06296052_105244 | Not Available | Negative | 1809805 - 1812909 | 117564.0 |
| cell wall-associated hydrolase, nlpc family | SAMN06296052_105245 | Not Available | Negative | 1813028 - 1813669 | 24089.7 |
| hypothetical protein | SAMN06296052_105246 | Not Available | Negative | 1813784 - 1813873 | 3395.15 |
| hypothetical protein | SAMN06296052_105247 | Not Available | Negative | 1813870 - 1814142 | 10652.2 |
| haloalkane dehalogenase | SAMN06296052_105248 | Not Available | Negative | 1814162 - 1815058 | 35031.3 |
| asparagine synthase (glutamine-hydrolysing) | SAMN06296052_105249 | Not Available | Positive | 1815209 - 1817116 | 71561.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
