Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN06296052_105220 | Not Available | Positive | 1780946 - 1781641 | 26060.4 |
| cellulase (glycosyl hydrolase family 5) | SAMN06296052_105221 | Not Available | Negative | 1781727 - 1782704 | 37403.1 |
| endonuclease/exonuclease/phosphatase family protein | SAMN06296052_105222 | Not Available | Negative | 1782915 - 1783520 | 23750.2 |
| hypothetical protein | SAMN06296052_105223 | Not Available | Negative | 1783755 - 1784513 | 28386.2 |
| hypothetical protein | SAMN06296052_105224 | Not Available | Negative | 1784543 - 1785949 | 50457.7 |
| hypothetical protein | SAMN06296052_105225 | Not Available | Negative | 1785966 - 1786349 | 15053.9 |
| transcriptional regulator, arac family | SAMN06296052_105226 | Not Available | Positive | 1786481 - 1787461 | 36507.9 |
| hypothetical protein | SAMN06296052_105227 | Not Available | Positive | 1787540 - 1788475 | 34119.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN06296052_105228 | Not Available | Negative | 1788795 - 1789754 | 36039.6 |
| thioredoxin | SAMN06296052_105229 | Not Available | Positive | 1789973 - 1790638 | 24868.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
