Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix motif-containing protein | SAMN06296052_105210 | Not Available | Negative | 1763015 - 1765120 | 81175.2 |
| hypothetical protein | SAMN06296052_105211 | Not Available | Negative | 1765342 - 1766163 | 29309.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_105212 | Not Available | Positive | 1766478 - 1769753 | 119443.0 |
| susd and ragb outer membrane lipoprotein | SAMN06296052_105213 | Not Available | Positive | 1769759 - 1771195 | 53311.7 |
| hypothetical protein | SAMN06296052_105214 | Not Available | Positive | 1771255 - 1772532 | 44140.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06296052_105215 | Not Available | Positive | 1772749 - 1773552 | 28260.1 |
| dipeptidyl-peptidase 7. serine peptidase. merops family s46 | SAMN06296052_105216 | Not Available | Negative | 1773728 - 1776061 | 87806.9 |
| hypothetical protein | SAMN06296052_105217 | Not Available | Positive | 1776161 - 1776382 | 8224.15 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_105218 | Not Available | Negative | 1776537 - 1779044 | 91648.9 |
| hypothetical protein | SAMN06296052_105219 | Not Available | Positive | 1779406 - 1780881 | 56230.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
