Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate family 9 binding domain-like | SAMN06296052_105200 | Not Available | Negative | 1749613 - 1752150 | 95232.2 |
| hypothetical protein | SAMN06296052_105201 | Not Available | Negative | 1752244 - 1753083 | 31460.7 |
| hypothetical protein | SAMN06296052_105202 | Not Available | Negative | 1753288 - 1755171 | 71985.8 |
| hypothetical protein | SAMN06296052_105203 | Not Available | Positive | 1755568 - 1755816 | 9139.32 |
| hypothetical protein | SAMN06296052_105204 | Not Available | Positive | 1756135 - 1756503 | 14385.3 |
| hypothetical protein | SAMN06296052_105205 | Not Available | Negative | 1756558 - 1757217 | 25038.8 |
| protein of unknown function | SAMN06296052_105206 | Not Available | Positive | 1757567 - 1759549 | 75570.6 |
| transglutaminase-like superfamily protein | SAMN06296052_105207 | Not Available | Positive | 1759656 - 1761563 | 72190.2 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN06296052_105208 | Not Available | Positive | 1761785 - 1762195 | 15424.1 |
| rna polymerase, sigma subunit, sigz | SAMN06296052_105209 | Not Available | Positive | 1762414 - 1763031 | 23303.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
