Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN06296052_105190 | Not Available | Positive | 1739224 - 1740030 | 31401.9 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN06296052_105191 | Not Available | Positive | 1740217 - 1741428 | 44679.0 |
| uncharacterized conserved protein | SAMN06296052_105192 | Not Available | Positive | 1741560 - 1742045 | 18972.8 |
| ssu ribosomal protein s6p modification protein | SAMN06296052_105193 | Not Available | Positive | 1742055 - 1742957 | 32767.3 |
| hypothetical protein | SAMN06296052_105194 | Not Available | Positive | 1742959 - 1743900 | 34805.4 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN06296052_105195 | Not Available | Positive | 1744059 - 1746434 | 89099.0 |
| protein of unknown function | SAMN06296052_105196 | Not Available | Positive | 1746437 - 1747423 | 36616.1 |
| hypothetical protein | SAMN06296052_105197 | Not Available | Negative | 1747498 - 1747989 | 18108.7 |
| methyltransferase domain-containing protein | SAMN06296052_105198 | Not Available | Negative | 1748100 - 1748888 | 30189.8 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN06296052_105199 | Not Available | Negative | 1748929 - 1749600 | 24678.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
