Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06296052_105160 | Not Available | Positive | 1709693 - 1709914 | 8576.71 |
| uv-damage endonuclease | SAMN06296052_105161 | Not Available | Negative | 1709920 - 1710813 | 34046.5 |
| carboxypepd_reg-like domain-containing protein | SAMN06296052_105162 | Not Available | Negative | 1710975 - 1711610 | 23746.3 |
| hypothetical protein | SAMN06296052_105163 | Not Available | Negative | 1711807 - 1712334 | 20112.0 |
| hypothetical protein | SAMN06296052_105164 | Not Available | Negative | 1712612 - 1713844 | 46141.3 |
| dna replication and repair protein radc | SAMN06296052_105165 | Not Available | Positive | 1713997 - 1714716 | 26033.7 |
| conserved hypothetical protein | SAMN06296052_105166 | Not Available | Negative | 1714720 - 1714920 | 7360.88 |
| hypothetical protein | SAMN06296052_105167 | Not Available | Negative | 1715057 - 1715551 | 18247.2 |
| hypothetical protein | SAMN06296052_105168 | Not Available | Negative | 1715562 - 1715792 | 8772.36 |
| protease i | SAMN06296052_105169 | Not Available | Negative | 1715881 - 1716492 | 22235.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
